5
Configuration
Diplotopia pipeline documentation
Preface
1
Requirements and installation
2
DIPLOTOPIA pipeline and program descriptions
3
Input and usage
4
Saga Users
5
Configuration
6
Output files
7
Contribution and support
8
Summary
References
Changes
9
Change log in different versions
10
Change log
Scientific reasoning
11
Choices and reason behind those choices for : FILTER_CONTIGS track
12
Choices and reason behind those choices for : HAPLOPURGE track
13
Choices and reason behind those choices for : VARWRRUMM track
Table of contents
5.1
Base configuration
5
Configuration
5.1
Base configuration
HPC configuration
Process resource definitions
4
Saga Users
6
Output files